Mornings in my house can be… hectic. Between trying to get everyone out the door and making sure breakfast isn’t just a handful of cereal, I’m always on the hunt for quick, satisfying recipes.
That’s how these Greek yogurt chocolate chip muffins came into my life. I spotted the idea while scrolling one evening and thought—moist muffins, melty chocolate chips, and a protein boost from Greek yogurt? Yes, please.
Now they’re the kind of breakfast that makes the kitchen smell like a bakery, without the early wake-up call.
Why This Recipe Is Worth Making
- Chocolatey
- Protein-packed
- Moist
- Easy
Greek Yogurt Chocolate Chip Muffins Recipe
Here’s everything needed for the muffins, listed in order with amounts and descriptions.
Ingredient | Amount | Description |
---|---|---|
Cake flour | 1 3/4 cups | Creates a tender, light muffin texture. |
Baking soda | 1/2 tsp | Helps muffins rise for fluffiness. |
Unsalted butter, room temperature | 3 tablespoons | Adds rich, creamy flavor to the batter. |
Sugar | 2/3 cup | Sweetens the muffins perfectly. |
Medium eggs | 3 | Binds ingredients for a cohesive structure. |
Vanilla extract | 1/2 tbsp | Infuses warm, aromatic depth. |
0% Greek yogurt | 1 1/4 cups | Adds moisture and a protein boost. |
Semi-sweet chocolate chips | 9 tbsp | Brings melty, chocolatey bursts. |
Kitchen Gear Checklist
- 12-cup muffin tin – Bakes muffins evenly.
- Hand mixer – Creams butter and sugar smoothly.
- Mixing bowls (2) – Separates dry and wet ingredients.
- Whisk and spatula – Mixes and folds batter precisely.
- Cookie scoop – Portions batter evenly.
Your Easy Step-by-Step Guide

Step 1: Preheat Oven
Set the oven to 375°F (190°C), allowing 10-12 minutes to heat for even baking. Line a 12-cup muffin tin with paper liners and lightly spray with cooking spray to prevent sticking.
Step 2: Mix Dry Ingredients
In a medium bowl, whisk 1 3/4 cups cake flour and 1/2 tsp baking soda for 20 seconds to combine evenly—ensure no clumps for a smooth batter. Set aside to keep dry ingredients ready for later.
Step 3: Cream Butter and Sugar
In a large bowl, use a hand mixer on medium speed to cream 3 tbsp room-temperature unsalted butter and 2/3 cup sugar for 1-2 minutes until light and fluffy—scrape sides with a spatula to incorporate fully. This creates a tender muffin texture.
Step 4: Add Eggs and Vanilla
Beat 3 medium eggs and 1/2 tbsp vanilla extract in a small bowl until frothy, about 20 seconds. Add to the butter-sugar mixture and mix on low speed for 30 seconds until just combined, avoiding overmixing to keep muffins light.
Step 5: Incorporate Greek Yogurt
Add 1 1/4 cups 0% Greek yogurt to the wet mixture—mix on low speed for 20-30 seconds until smooth and creamy. The yogurt should fully blend, creating a moist, protein-rich batter base.
Step 6: Combine Wet and Dry
Add the dry flour mixture to the wet ingredients in two batches, mixing on low speed for 30-40 seconds total until no flour streaks remain—stop as soon as combined to avoid tough muffins. The batter should be thick but smooth, like pancake batter.
Step 7: Fold in Chocolate Chips
Gently fold in 9 tbsp semi-sweet chocolate chips with a spatula, using 4-5 light folds to distribute evenly without overmixing. This ensures chocolatey bursts in every bite without deflating the batter.
Step 8: Bake and Cool
Use a cookie scoop to portion batter into the 12 muffin cups, filling each about 3/4 full for even rising. Bake for 16-18 minutes until golden and a toothpick inserted in the center comes out clean. Cool in the tin for 5 minutes, then transfer to a rack for 10 minutes before serving.
Storage and Serving
Store in an airtight container at room temperature for 2 days or in the fridge for 5 days—reheat at 300°F for 5 minutes for a fresh-baked feel. Serve as a breakfast treat, snack, or dessert with coffee or fruit.
Troubleshooting Common Muffin Problems
Learn from common mistakes to achieve perfect results every time.
#1 Dense, Heavy Muffins
Cause: Overmixing the batter or using cold ingredients Solution: Mix just until ingredients are combined and ensure all ingredients are at room temperature
#2 Dry, Crumbly Texture
Cause: Overbaking or too much flour Solution: Check oven temperature with a thermometer and measure flour by spooning into cup and leveling
#3 Muffins Don’t Rise Properly
Cause: Old baking soda or oven temperature too low Solution: Test baking soda freshness and verify oven temperature with an oven thermometer
#4 Chocolate Chips Sink to Bottom
Cause: Batter too thin or chips too large Solution: Toss chips in a little flour before folding in, and use standard-sized chips.
Creative Variations for Every Taste
Transform the basic recipe into exciting new flavors with these tested variations.
Double Chocolate Decadence
Replace 1/4 cup cake flour with cocoa powder and add an extra 2 tablespoons chocolate chips. Perfect for serious chocolate lovers.
Berry Bliss Combination
Substitute chocolate chips with 3/4 cup fresh blueberries or chopped strawberries. Toss berries in flour to prevent sinking.
Tropical Paradise Twist
Add 1/3 cup shredded coconut and 1/4 cup chopped macadamia nuts for a vacation-inspired treat.
Banana Chocolate Fusion
Reduce Greek yogurt to 1 cup and add 1/2 cup mashed ripe banana for natural sweetness and extra moisture.
Espresso Chocolate Enhancement
Add 1 tablespoon instant espresso powder to intensify chocolate flavors and create a sophisticated coffee shop taste.
Nutritional Breakdown
Nutrient | Per Muffin (12 muffins total) |
---|---|
Calories | 190 kcal |
Fat | 7g |
Protein | 6g |
Total Carbs | 27g |
Fiber | 1g |
Net Carbs | 26g |
Note: Values are approximate and vary by brands.
Pairing Suggestions
- Serve warm with a dollop of Greek yogurt and fresh berries for a complete, balanced breakfast that feels indulgent but supports your health goals.
- Cut muffins in half and lightly toast for a sophisticated afternoon tea treat. Serve with quality butter or cream cheese.
- Create a muffin bar with various toppings: honey butter, flavored cream cheese, fresh fruit, and nuts for guests to customize their treats.
- Wrap individual muffins in parchment paper tied with baker’s twine for portable breakfast gifts or lunchbox treats.
FAQs
Can I use full-fat Greek yogurt?
Yes, it adds richer flavor—use the same amount for similar texture.
Can I add fruit to the batter?
Yes, fold in 1/4 cup mashed berries with the chips for extra flavor.
Can I make these gluten-free?
Use a 1:1 gluten-free flour blend; add 1 tsp baking powder if not cake flour.
Can I freeze these muffins?
Yes, freeze in an airtight container for 1 month—thaw at room temp for 2 hours.
Conclusion
These muffins never last long around here. One batch, and they’re “mysteriously” gone by the next day. They’re just the right mix of fluffy, chocolatey, and not-too-sweet, which makes them work for breakfast, snacks, or the “I just need something with coffee” moment. You might even catch yourself making them twice in one week, purely for quality control, of course.
Greek Yogurt Chocolate Chip Muffins

Ingredients
- Cake flour - 1 3/4 cups
- Baking soda - 1/2 tsp
- Unsalted butter, room temperature - 3 tablespoons
- Sugar - 2/3 cup
- Medium eggs - 3
- Vanilla extract - 1/2 tbsp
- 0% Greek yogurt - 1 1/4 cups
- Semi-sweet chocolate chips - 9 tbsp
Instructions
Step 1. Preheat oven to 375°F (190°C). Line a 12-cup muffin tin and lightly spray with cooking spray.
Step 2. Whisk cake flour and baking soda in a medium bowl; set aside.
Step 3. In a large bowl, cream butter and sugar with a hand mixer for 1–2 minutes until fluffy.
Step 4. Whisk eggs and vanilla in a small bowl. Add to butter mixture and mix until just combined.
Step 5. Add Greek yogurt and mix until smooth.
Step 6. Add dry ingredients in two batches, mixing just until no flour remains. Batter should be thick.
Step 7. Fold in chocolate chips gently with a spatula.
Step 8. Scoop batter into muffin cups (¾ full). Bake 16–18 minutes until golden and a toothpick comes out clean.